PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091496.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 218aa    MW: 24954.4 Da    PI: 7.1654
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091496.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.2e-093279655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                     ++E++RR++++  +++L +llP++   +sk   +  + + +A+++IksL+
  XP_010091496.1 32 RIIEKNRRNQMKVLYSKLNSLLPPQ---NSKEvQTLPDQVDEAINHIKSLE 79
                    68**********************9...88888****************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-102597IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.022678IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.05E-42882No hitNo description
Gene3DG3DSA:4.10.280.108.8E-93195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-53279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00113284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MGLFVVEDLG ANKQVQAMDQ GSQSSATKIE RRIIEKNRRN QMKVLYSKLN SLLPPQNSKE  60
VQTLPDQVDE AINHIKSLEA RLKKYKEKKK SLLGRKRSYT CANSLESVGS QRSPQIEIHE  120
IGSVIEVVLI TGLDNQFIFY ELIRILHEER ADVVDAKYSV SRDSIFHVVH AEIADSIFGA  180
TKISERLKRF VSGSSSDIEL QPDQWWDDFE IHPELLKF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010091496.11e-160hypothetical protein L484_010338
TrEMBLW9RA841e-160W9RA84_9R
STRINGGLYMA12G12880.11e-75(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-27bHLH family protein